Publications

Total: 142
Defining approaches to settlement mapping for public health management in Kenya using medium spatial resolution satellite imagery
Remote Sensing of Environment, 2004. 93: p. 42-52.
Author(s): Tatem, A.J., Noor, A.M. and S.I. Hay
Type: method. Year: 2004
DOI: 10.1016/j.rse.2004.06.014.

Abstract: This paper presents an appraisal of satellite imagery types and texture measures for identifying and delineating settlements in four Districts of Kenya chosen to represent the variation in human ecology across the country. Landsat Thematic Mapper (TM) and Japanese Earth Resources Satellite-1 (JERS-1) synthetic aperture radar (SAR) imagery of the four districts were obtained and supervised per-pixel classifications of image combinations tested for their efficacy at settlement delineation. Additional data layers including human population census data, land cover, and locations of medical facilities, villages, schools and market centres were used for training site identification and validation. For each district, the most accurate approach was determined through the best correspondence with known settlement and nonsettlement pixels. The resulting settlement maps will be used in combination with census data to produce medium spatial resolution population maps for improved public health planning in Kenya.
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Identifying Malaria Transmission Foci for Elimination Using Human Mobility Data
PLoS Comput Biol 12(4): e1004846.
Author(s): Nick W. Ruktanonchai, Patrick DeLeenheer, Andrew J. Tatem, Victor A. Alegana, T. Trevor Caughlin, Elisabeth zu Erbach-Schoenberg, Christopher Lourenço, Corrine W. Ruktanonchai, David L. Smith
Type: method. Year:
DOI: 10.1371/journal.pcbi.1004846.

Abstract: Humans move frequently and tend to carry parasites among areas with endemic malaria and into areas where local transmission is unsustainable. Human-mediated parasite mobility can thus sustain parasite populations in areas where they would otherwise be absent. Data describing human mobility and malaria epidemiology can help classify landscapes into parasite demographic sources and sinks, ecological concepts that have parallels in malaria control discussions of transmission foci. By linking transmission to parasite flow, it is possible to stratify landscapes for malaria control and elimination, as sources are disproportionately important to the regional persistence of malaria parasites. Here, we identify putative malaria sources and sinks for pre-elimination Namibia using malaria parasite rate (PR) maps and call data records from mobile phones, using a steady-state analysis of a malaria transmission model to infer where infections most likely occurred. We also examined how the landscape of transmission and burden changed from the pre-elimination setting by comparing the location and extent of predicted pre-elimination transmission foci with modeled incidence for 2009. This comparison suggests that while transmission was spatially focal pre-elimination, the spatial distribution of cases changed as burden declined. The changing spatial distribution of burden could be due to importation, with cases focused around importation hotspots, or due to heterogeneous application of elimination effort. While this framework is an important step towards understanding progressive changes in malaria distribution and the role of subnational transmission dynamics in a policy-relevant way, future work should account for international parasite movement, utilize real time surveillance data, and relax the steady state assumption required by the presented model.
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